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Scientific computations

General data

Course ID: 1000-712ONA
Erasmus code / ISCED: (unknown) / (unknown)
Course title: Scientific computations
Name in Polish: Obliczenia naukowe
Organizational unit: Faculty of Mathematics, Informatics, and Mechanics
Course groups: Obligatory courses for 1st year Bioinformatics
ECTS credit allocation (and other scores): 5.00 Basic information on ECTS credits allocation principles:
  • the annual hourly workload of the student’s work required to achieve the expected learning outcomes for a given stage is 1500-1800h, corresponding to 60 ECTS;
  • the student’s weekly hourly workload is 45 h;
  • 1 ECTS point corresponds to 25-30 hours of student work needed to achieve the assumed learning outcomes;
  • weekly student workload necessary to achieve the assumed learning outcomes allows to obtain 1.5 ECTS;
  • work required to pass the course, which has been assigned 3 ECTS, constitutes 10% of the semester student load.

view allocation of credits
Language: Polish
Type of course:

obligatory courses

Prerequisites (description):

introductory programming,

basic linear algebra,

basic calculus

Short description:

Basics of scientific computations with examples in the python language.

Full description:

1. Representation of numbers, computer arithmetic, numerical stability of algorithms.

2. Vectors and matrices – simple operations (transposition, multiplication, inversion).

3. Vector functions, element-by-element operations, logical operations.

4. Graphs of one- and multidimensional functions.

5. Systems of linear equations, LU decomposition, condition number.

6. Nonlinear scalar equations.

7. Linear least squares problem. QR decomposition.

8. Eigenvalue problem.

9. Lagrange interpolation.

10. Spline functions.

11. Numerical differentiation (polynomials, arbitrary functions).

12. Numerical integration (quadratures).

Bibliography:

A primer on scientific programming with python, Lagtangen

Scientific Programming, Barone, Marinari, Organtini, Ricci-Tersenghi

Numerical Recipes, Press Teukolsky, Veterling, Flannery

Learning outcomes:

Knowedge and abilities. The student:

- Knows the basic properties and limitations of floating-point arithmetic in a computer and possible calculation errors.

- Knows the methods of operating on matrices and vectors using Python libraries.

- Knows the method of directly solving systems of linear equations via the LU decomposition, understands the importance of matrix condition number in context of solving such systems and knows the appropriate practices.

- Knows the definition of the linear least squares problem and its solution via the QR decomposition, as well as applications in curve fitting.

- Knows the methods of approximate solution of nonlinear scalar equations and their limitations.

- Knows the power and inverse power methods for finding eigenvectors and knows under what assumptions these methods converge, knows examples of applications.

- Can approximate a function using Lagrange interpolation.

- Knows the definition of the spline space for fixed nodes; in particular, knows what the space of linear splines and the space of cubic splines are.

- Is able to determine in what situation the linear least squares problem should be applied, when spline interpolation, and when Lagrange interpolation should be applied.

- Knows the basic methods of processing and presenting numerical data on graphs: linear, bar, boxplot, heat maps, histograms, and libraries in Python for creating such plots.

- Knows the numerical methods of approximating the derivative of a real function and knows that the accuracy of the approximation depends not only on the method used, but also on the regularity of the function.

- Knows how to calculate the approximation of the definite integral of a real function using the trapezoidal method and the parabolic method.

Social competences. The student:

- Understands the importance of scientific calculations as a tool for solving tasks arising in the modeling of natural phenomena and technical challenges.

- Understands the ethical problems related to possible manipulations in the graphical presentation of data.

- Understands the limitations resulting from conducting calculations in finite precision arithmetic.

Assessment methods and assessment criteria:

Test, homeworks/classroom exercises, exam.

Classes in period "Summer semester 2024/25" (past)

Time span: 2025-02-17 - 2025-06-08
Selected timetable range:
Go to timetable
Type of class:
Lab, 30 hours more information
Lecture, 30 hours more information
Coordinators: Konrad Sakowski
Group instructors: Konrad Sakowski
Students list: (inaccessible to you)
Credit: Examination

Classes in period "Summer semester 2025/26" (in progress)

Time span: 2026-02-16 - 2026-06-07
Selected timetable range:
Go to timetable
Type of class:
Lab, 30 hours more information
Lecture, 30 hours more information
Coordinators: Konrad Sakowski
Group instructors: Konrad Sakowski
Students list: (inaccessible to you)
Credit: Course - Examination
Lecture - Examination
Course descriptions are protected by copyright.
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