Obligatory courses for 2nd stage Bioinformatics (course group defined by Faculty of Mathematics, Informatics, and Mechanics)
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2023Z - Winter semester 2023/24 2023L - Summer semester 2023/24 2024Z - Winter semester 2024/25 2024L - Summer semester 2024/25 (there could be semester, trimester or one-year classes) |
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| 1000-717ADP | n/a |
 
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Classes
Summer semester 2023/24
Groups
Brief description
Knowledge of the structure of larger bioinformatic software projects. Students create a team project, learn how to use code version control systems and how to collaborate on code writing. They discuss history of development of some leading bioinformatics software packages, libraries and databases. Possible options for choice of software licenses are discussed. They talk about the role of open source and free software in scientific programs and their role in reproducibility of research. |
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| 1000-719GP2 |
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n/a |
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n/a |
Classes
Winter semester 2023/24
Groups
Brief description
he lecture aims to familiarize students with selected models, algorithms, and tools used in comparative genomics, particularly on trees, and their application in various contexts. The planned exercises will be partly in the form of a computer laboratory. |
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| 1000-717PRL |
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n/a |
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Classes
Winter semester 2023/24
Groups
Brief description
The aim of the course is to present the basics of computational design of biologically active compounds. |
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| 1000-719bMSB | n/a |
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n/a |
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Classes
Summer semester 2023/24
Groups
Brief description
Models and inferences in computational molecular biology, focusing on how statistics and machine learning methods are used to understand complex systems. |
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| 1000-718SAD |
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n/a |
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n/a |
Classes
Winter semester 2023/24
Groups
Brief description
Advanced course in machine learning methods. |
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